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SRX369396: GSM1253338: 90h nitrogen starved cell rep2; Rhodopseudomonas palustris CGA009; RNA-Seq
1 ILLUMINA (Illumina HiSeq 2000) run: 14.8M spots, 472.7M bases, 292.2Mb downloads

Submitted by: Gene Expression Omnibus (GEO)
Study: Non-growing Rhodopseudomonas palustris increases the hydrogen gas yield from acetate by shifting from the glyoxylate shunt to the tricarboxylic acid cycle
PRJNA225506 • SRP032342 • All experiments • All runs
show Abstracthide Abstract
Transcriptome analysis was performed in order to better understand the metabolic activity of non-growing cells of Rhodopseudomonas palustris for improve biofuel production. Overall design: Gene expression profilings of cells from various time points during non-growing phase were compared using RNA-seq.
Sample: 90h nitrogen starved cell rep2
SAMN02387053 • SRS494923 • All experiments • All runs
Organism: Rhodopseudomonas palustris CGA009
Library:
Instrument: Illumina HiSeq 2000
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: SINGLE
Construction protocol: RNA was purified by using the QIAGEN miRNeasy Mini kit followed by Ambion's Turbo DNase treatment RNA-seq library was constructed by using R. palustris-specific selective primers and NuGENs Ovation Ultralow DR Multiplex System
Experiment attributes:
GEO Accession: GSM1253338
Links:
External link:
Runs: 1 run, 14.8M spots, 472.7M bases, 292.2Mb
Run# of Spots# of BasesSizePublished
SRR102002814,771,960472.7M292.2Mb2014-02-04

ID:
528078

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